Educational and Research Institute Government Departments Closing in 0 days TDR #40020485

Tender For Dna Sample , Cost Of Whole Genome Resequencing Of Lentil (Lens Culinaris)Mutants.: Extraction Of Genomic Dna With Assured Quality In Nanodrop Followed By Very Good Quality Library Preparation And Sequencing. At Least 90% Of The Trimmed Seq

Issued by Government Departments · mohanpur, West Bengal
Tender Value
Ref. Documents
Estimated cost
Bid Submission
13 Oct 2023
0 days left
EMD
2000
Bank guarantee accepted
Document Fee
Ref. Documents
Non-refundable
Tender Type
Online

Tender Overview

Competition Type
NCB
Bidding Type
Tender
Location / State
mohanpur → West Bengal
EMD Exemption
Not Available
Quantity
Not Available

Project Description

Dna Sample , Cost Of Whole Genome Resequencing Of Lentil ( Lens Culinaris ) Mutants.: Extraction Of Genomic Dna With Assured Quality In Nanodrop Followed By Very Good Quality Library Preparation And Sequencing. At Least 90% Of The Trimmed Sequenced Bases Must Be Of Q30. The Trimmed Sequencing Data Must Be 80Gb ( 20X ) Or Above The Lentil Reference Genome ( Genome Size, 4Gb ) ; Assembling Andpairwise Comparison With The Reference Genome; Snp Calling:Snps And Indels Are To Be Detected Using Soap Snp Andsoap Indel, Respectively. Snp Annotation ( Including Synonymousand Non-Synonymous Snp Mutations ) And Indelannotation Must Be Performed According To The Lens Culinarisreference Genome With The Assigned Linkage Group. Free Pick Up Of Samples In Dry Ice From Bckv Must Be Assured In The Quotation.

BOQ

Name of Work : Adhoc-funded project
Sl. No. Item Description
1Cost of whole genome resequencing of Lentil (Lens culinaris)mutants.: Extraction of genomic DNA with assured quality in nanodrop followed by very good quality library preparation and Sequencing. At least 90% of the trimmed sequenced bases must be of Q30. The trimmed sequencing data must be 80GB (20X) or above the Lentil reference genome (Genome size, 4GB); assembling andpairwise comparison with the reference genome; SNP calling:SNPs and InDels are to be detected using SOAP SNP andSOAP indel, respectively. SNP annotation (including synonymousand non-synonymous SNP mutations) and InDelannotation must be performed according to the Lens culinarisreference genome with the assigned linkage group. Free pick up of samples in dry ice from BCKV must be assured in the quotation.

AI Tender Summary

OUR REF NO 40020485
AUTHORITY Government Departments
TENDER VALUE Ref. Documents
LAST DATE 13-10-2023
Authority
Authority Name Bidhan Chandra Krishi Viswavidyalaya
Work Description Dna Sample , Cost Of Whole Genome Resequencing Of Lentil ( Lens Culinaris ) Mutants.: Extraction Of Genomic Dna With Assured Quality In Nanodrop Followed By Very Good Quality Library Preparation And Sequencing. At Least 90% Of The Trimmed Sequenced Bases Must Be Of Q30. The Trimmed Sequencing Data Must Be 80Gb ( 20X ) Or Above The Lentil Reference Genome ( Genome Size, 4Gb ) ; Assembling Andpairwise Comparison With The Reference Genome; Snp Calling:Snps And Indels Are To Be Detected Using Soap Snp Andsoap Indel, Respectively. Snp Annotation ( Including Synonymousand Non-Synonymous Snp Mutations ) And Indelannotation Must Be Performed According To The Lens Culinarisreference Genome With The Assigned Linkage Group. Free Pick Up Of Samples In Dry Ice From Bckv Must Be Assured In The Quotation.
Basic Detail
Tender No BCKV/CRU/2324/PI(IAEA)/Ten2
Bidding Type Tender
Location
City mohanpur
State West Bengal
Key Dates
Publish Date 04 Oct 2023
Submission Date 13 Oct 2023
Open Date 16 Oct 2023
Finance
Tender Value Ref. Documents
Tender Fee Ref. Documents
EMD 2000
Exemption Not Available
Document List
be42406d-1908-4e1d-a8c6-e91ca8611b5d.html
BOQ_1227380.xls
Tendernotice_1.pdf

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Tender Timeline

Oct 04, 2023
11:30 IST

Tender Published

Tender notice published.

Completed
Oct 13, 2023
17:00 IST

Bid Submission Deadline

Online submission via eProcurement portal.

Completed
Oct 16, 2023

Bid Opening Date

Technical bids will be opened and evaluated.

Completed

Tender Documents

Download All (ZIP) ↓
html

be42406d-1908-4e1d-a8c6-e91ca8611b5d.html

xls

BOQ_1227380.xls

pdf

Tendernotice_1.pdf

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